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          "weight": 59,
          "is_intron": false
        },
        {
          "type": "CMT",
          "payload": "Operational risk: CSP risk=20, API key refs=3.",
          "evidence": "20 inline script/handler risks; 3 API key references",
          "weight": 95,
          "is_intron": false
        },
        {
          "type": "END",
          "payload": "End operational genome for f4.html.",
          "evidence": "",
          "weight": 50,
          "is_intron": false
        }
      ]
    },
    {
      "genome_id": "F4::PROMPT",
      "source_path": "f4.html",
      "kind": "prompt",
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          "You are the [EXPRESS] operator. Translate this <Phenotype> into an <Artifact>. Provide the <ProgramTheory> (mapping Entities, Morphisms, Constraints, States, Invariants) in Markdown, then a single, self-contained, ful...",
          "[mutate] Apply divergent failure-pressure to this <Phenotype>. Invert the conceptual approach, maintain ^Trace lineage traits, but force a radical lateral shift in the <Structure>.",
          "[repair] Apply restorative pressure to this failing <Phenotype>. Harden the <Constraints>, resolve logical dead-ends, and stabilize the <State> flow to ensure survival upon re-expression.",
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        "promptBlocks": [
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          {
            "kind": "js_template",
            "label": "POPULATION_EXPRESS_PROMPT",
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          {
            "kind": "js_template",
            "label": "ASSAY_TEST_PROMPT",
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          {
            "kind": "js_template",
            "label": "ARTIFACT_EXPRESS_PROMPT",
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            "label": "MUTATE_DIVERGE_PROMPT",
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          {
            "kind": "js_template",
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        ],
        "promptHitCount": 7,
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          {
            "type": "CST",
            "payload": "Default invariant constraint.",
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          "type": "MUT",
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          "evidence": "js_template prompt block in source; label=POPULATION_EXPRESS_PROMPT",
          "weight": 97,
          "is_intron": false
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        {
          "type": "OUT",
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          "evidence": "js_template prompt block in source; label=ASSAY_TEST_PROMPT",
          "weight": 97,
          "is_intron": false
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        {
          "type": "OUT",
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          "evidence": "js_template prompt block in source; label=ARTIFACT_EXPRESS_PROMPT",
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          "is_intron": false
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          "type": "MUT",
          "payload": "MUTATE_DIVERGE_PROMPT: [mutate] Apply divergent failure-pressure to this <Phenotype>. Invert the conceptual approach, maintain ^Trace lineage traits, but force a radical lateral shift in the <Structure>.",
          "evidence": "js_template prompt block in source; label=MUTATE_DIVERGE_PROMPT",
          "weight": 93,
          "is_intron": false
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        {
          "type": "OUT",
          "payload": "MUTATE_REPAIR_PROMPT: [repair] Apply restorative pressure to this failing <Phenotype>. Harden the <Constraints>, resolve logical dead-ends, and stabilize the <State> flow to ensure survival upon re-expression.",
          "evidence": "js_template prompt block in source; label=MUTATE_REPAIR_PROMPT",
          "weight": 93,
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        {
          "type": "OUT",
          "payload": "imgPrompt: Visual <Phenotype> representation based on: ${state.winningPhenotypeText}. High quality, structural, bounded environment representation.",
          "evidence": "js_template prompt block in source; label=imgPrompt",
          "weight": 93,
          "is_intron": false
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        {
          "type": "EVD",
          "payload": "Prompt genome assembled from 1 literal codon payloads and 7 source prompt blocks in 2 script blocks.",
          "evidence": "visibleWords=161; promptBlocks=7; literalCodons=1; apiHosts=cdn.tailwindcss.com,generativelanguage.googleapis.com",
          "weight": 76,
          "is_intron": false
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          {
            "type": "CMT",
            "payload": "This image is procedurally generated.",
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          {
            "type": "CMT",
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        ],
        "literalCodonCount": 2,
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        "visibleTextSample": "GENOMA SCOPE (Component v2.1 - Final) GENOMA SCOPE Import Genome &times;",
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      "sequence": [
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          "type": "ROW_S",
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          "type": "TXT",
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          "evidence": "#0a0c10 | #c9d1d9 | hsla(190, 100%, 75%, 0.4) | hsla(210, 100%, 80%, 0.1) | rgba(40, 50, 70, 0.2) | #21252b | #e0e0e0 | #2a2a3a | 'Roboto Mono', monospace | var(--scope-font-mono) | var(--font-family)",
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        {
          "type": "CDE",
          "payload": "Runtime: 1 script blocks, 15 functions, 0 fetch calls, chrome API refs=0, localStorage refs=0.",
          "evidence": "fonts.googleapis.com | fonts.gstatic.com | picsum.photos | en.wikipedia.org",
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          "type": "HPL",
          "payload": "Navigation/control surface: 1 links, 2 buttons, 1 inputs, 0 textareas, 0 forms.",
          "evidence": "inlineHandlers=0; sections=0",
          "weight": 45,
          "is_intron": false
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        {
          "type": "IMG",
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          "evidence": "1 img tags; 1 video tags",
          "weight": 55,
          "is_intron": false
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        {
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          "is_intron": false
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        {
          "type": "END",
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          "evidence": "",
          "weight": 50,
          "is_intron": false
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      ]
    },
    {
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        "headings": 1,
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        {
          "type": "EVD",
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          "evidence": "visibleWords=11; promptBlocks=0; literalCodons=2; apiHosts=fonts.googleapis.com,fonts.gstatic.com,picsum.photos,en.wikipedia.org",
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      ]
    },
    {
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      "title": "GENOMA // Demo",
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        "h1": [
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        "headings": 1,
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        "flex": 4,
        "functions": 3,
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        "localStorage": 0,
        "chromeApi": 0,
        "apiHosts": [
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        "colors": [
          "#000",
          "#fff"
        ],
        "fontFamilies": [
          "ui-monospace, SFMono-Regular, Menlo, Consolas, \"Liberation Mono\", monospace"
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        "promptHits": [],
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        "literalCodons": [],
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        "companionFiles": []
      },
      "sequence": [
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          "type": "ROW_S",
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          "is_intron": false
        },
        {
          "type": "STY",
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          "type": "CDE",
          "payload": "Runtime: 1 script blocks, 3 functions, 0 fetch calls, chrome API refs=0, localStorage refs=0.",
          "evidence": "www.youtube.com",
          "weight": 33,
          "is_intron": false
        },
        {
          "type": "HPL",
          "payload": "Navigation/control surface: 15 links, 10 buttons, 0 inputs, 0 textareas, 0 forms.",
          "evidence": "inlineHandlers=0; sections=5",
          "weight": 65,
          "is_intron": false
        },
        {
          "type": "IMG",
          "payload": "Media surface: images=0, iframes=2, canvas=0, video=0.",
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          "weight": 51,
          "is_intron": false
        },
        {
          "type": "CMT",
          "payload": "Operational risk: CSP risk=1, API key refs=1.",
          "evidence": "1 inline script/handler risks; 1 API key references",
          "weight": 50,
          "is_intron": false
        },
        {
          "type": "END",
          "payload": "End operational genome for demo.html.",
          "evidence": "",
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          "is_intron": false
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      ]
    },
    {
      "genome_id": "DEMO::PROMPT",
      "source_path": "demo.html",
      "kind": "prompt",
      "title": "GENOMA // Demo",
      "metrics": {
        "bytes": 9087,
        "h1": [
          "DEMO"
        ],
        "headings": 1,
        "buttons": 10,
        "links": 15,
        "inputs": 0,
        "textareas": 0,
        "images": 0,
        "iframes": 2,
        "canvas": 0,
        "videos": 0,
        "forms": 0,
        "sections": 5,
        "inlineHandlers": 0,
        "styleBlocks": 1,
        "scriptBlocks": 1,
        "cssVars": 5,
        "mediaQueries": 1,
        "keyframes": 0,
        "gradients": 0,
        "borderRadius": 0,
        "grid": 6,
        "flex": 4,
        "functions": 3,
        "asyncFunctions": 0,
        "fetchCalls": 0,
        "localStorage": 0,
        "chromeApi": 0,
        "apiHosts": [
          "www.youtube.com"
        ],
        "colors": [
          "#000",
          "#fff"
        ],
        "fontFamilies": [
          "ui-monospace, SFMono-Regular, Menlo, Consolas, \"Liberation Mono\", monospace"
        ],
        "promptHits": [],
        "promptBlocks": [],
        "promptHitCount": 0,
        "literalCodons": [],
        "literalCodonCount": 0,
        "codonWords": 0,
        "genomeWords": 2,
        "phenotypeWords": 0,
        "mutationWords": 2,
        "selectionWords": 0,
        "theoryWords": 0,
        "apiKeyRefs": 1,
        "cspRisk": 1,
        "words": 103,
        "visibleTextSample": "GENOMA // Demo DEMO Hub Video G2 G1 Run Order 1. G2 Workbench Preview 2. G1 Engine Preview 3. Prompt Breeder Preview 4. Prompt Husbandry Preview 5. F4 Preview 6. Scope Preview 7. G2 Harness Preview 8. G1 Harness Preview 9. Video Page Preview 10. YouTube Preview No API key is required for this harness. It opens the local project pages directly. Model buttons inside individual prototypes still need backend/API integ...",
        "companionFiles": []
      },
      "sequence": [
        {
          "type": "RSN",
          "payload": "Read GENOMA // Demo as a prototype surface. Infer purpose from controls, copy, and runtime hooks without inventing missing claims.",
          "evidence": "No direct evidence extracted.",
          "weight": 45,
          "is_intron": true
        },
        {
          "type": "EVD",
          "payload": "No literal prompt blocks were extracted. Ground any future interpretation in source metrics: 103 visible words, 1 script blocks, 1 style blocks.",
          "evidence": "GENOMA // Demo DEMO Hub Video G2 G1 Run Order 1. G2 Workbench Preview 2. G1 Engine Preview 3. Prompt Breeder Preview 4. Prompt Husbandry Preview 5. F4 Preview 6. Scope Preview 7. G2 Harness Preview 8. G1 Harness Preview 9. Video Page Preview 10. YouTube Preview No API key is required for this harness. It opens the local project pages directly. Model buttons inside individual prototypes still need backend/API integ...",
          "weight": 42,
          "is_intron": true
        },
        {
          "type": "OUT",
          "payload": "Output includes embedded frames. Treat iframe content as a share/preview surface, not the same as extension runtime.",
          "evidence": "buttons=10; inputs=0; media=2",
          "weight": 42,
          "is_intron": true
        },
        {
          "type": "FLR",
          "payload": "Expected failures: missing API key, inline script/CSP portability. Respond with partial genome plus clear missing condition instead of silent breakage.",
          "evidence": "apiKeyRefs=1; cspRisk=1; fetchCalls=0",
          "weight": 45,
          "is_intron": true
        }
      ]
    },
    {
      "genome_id": "VIDEO::OPERATIONAL",
      "source_path": "video.html",
      "kind": "operational",
      "title": "GENOMA // Video",
      "metrics": {
        "bytes": 3778,
        "h1": [
          "VIDEO"
        ],
        "headings": 1,
        "buttons": 0,
        "links": 5,
        "inputs": 0,
        "textareas": 0,
        "images": 0,
        "iframes": 1,
        "canvas": 0,
        "videos": 0,
        "forms": 0,
        "sections": 5,
        "inlineHandlers": 0,
        "styleBlocks": 1,
        "scriptBlocks": 0,
        "cssVars": 4,
        "mediaQueries": 1,
        "keyframes": 0,
        "gradients": 0,
        "borderRadius": 0,
        "grid": 4,
        "flex": 2,
        "functions": 0,
        "asyncFunctions": 0,
        "fetchCalls": 0,
        "localStorage": 0,
        "chromeApi": 0,
        "apiHosts": [
          "www.youtube.com"
        ],
        "colors": [
          "#000",
          "#fff"
        ],
        "fontFamilies": [
          "ui-monospace, SFMono-Regular, Menlo, Consolas, \"Liberation Mono\", monospace"
        ],
        "promptHits": [],
        "promptBlocks": [],
        "promptHitCount": 0,
        "literalCodons": [],
        "literalCodonCount": 0,
        "codonWords": 0,
        "genomeWords": 1,
        "phenotypeWords": 0,
        "mutationWords": 0,
        "selectionWords": 0,
        "theoryWords": 0,
        "apiKeyRefs": 0,
        "cspRisk": 0,
        "words": 14,
        "visibleTextSample": "GENOMA // Video VIDEO Hub G2 G1 Context Genetics Engine Open YouTube Back To Hub",
        "companionFiles": []
      },
      "sequence": [
        {
          "type": "ROW_S",
          "payload": "Source frame for GENOMA // Video",
          "evidence": "path=video.html",
          "weight": 55,
          "is_intron": false
        },
        {
          "type": "TXT",
          "payload": "Text field: 14 words, 1 headings, density=sparse. H1=VIDEO.",
          "evidence": "GENOMA // Video VIDEO Hub G2 G1 Context Genetics Engine Open YouTube Back To Hub",
          "weight": 33,
          "is_intron": false
        },
        {
          "type": "STY",
          "payload": "Visual system: 1 style blocks, 4 CSS vars, 2 sampled colors, 0 radius rules, 0 animations.",
          "evidence": "#000 | #fff | ui-monospace, SFMono-Regular, Menlo, Consolas, \"Liberation Mono\", monospace",
          "weight": 53,
          "is_intron": false
        },
        {
          "type": "CDE",
          "payload": "Runtime: 0 script blocks, 0 functions, 0 fetch calls, chrome API refs=0, localStorage refs=0.",
          "evidence": "www.youtube.com",
          "weight": 30,
          "is_intron": false
        },
        {
          "type": "HPL",
          "payload": "Navigation/control surface: 5 links, 0 buttons, 0 inputs, 0 textareas, 0 forms.",
          "evidence": "inlineHandlers=0; sections=5",
          "weight": 35,
          "is_intron": false
        },
        {
          "type": "IMG",
          "payload": "Media surface: images=0, iframes=1, canvas=0, video=0.",
          "evidence": "1 iframe tags",
          "weight": 43,
          "is_intron": false
        },
        {
          "type": "CMT",
          "payload": "Operational risk: CSP risk=0, API key refs=0.",
          "evidence": "No major static risk signal detected.",
          "weight": 30,
          "is_intron": true
        },
        {
          "type": "END",
          "payload": "End operational genome for video.html.",
          "evidence": "",
          "weight": 50,
          "is_intron": false
        }
      ]
    },
    {
      "genome_id": "VIDEO::PROMPT",
      "source_path": "video.html",
      "kind": "prompt",
      "title": "GENOMA // Video",
      "metrics": {
        "bytes": 3778,
        "h1": [
          "VIDEO"
        ],
        "headings": 1,
        "buttons": 0,
        "links": 5,
        "inputs": 0,
        "textareas": 0,
        "images": 0,
        "iframes": 1,
        "canvas": 0,
        "videos": 0,
        "forms": 0,
        "sections": 5,
        "inlineHandlers": 0,
        "styleBlocks": 1,
        "scriptBlocks": 0,
        "cssVars": 4,
        "mediaQueries": 1,
        "keyframes": 0,
        "gradients": 0,
        "borderRadius": 0,
        "grid": 4,
        "flex": 2,
        "functions": 0,
        "asyncFunctions": 0,
        "fetchCalls": 0,
        "localStorage": 0,
        "chromeApi": 0,
        "apiHosts": [
          "www.youtube.com"
        ],
        "colors": [
          "#000",
          "#fff"
        ],
        "fontFamilies": [
          "ui-monospace, SFMono-Regular, Menlo, Consolas, \"Liberation Mono\", monospace"
        ],
        "promptHits": [],
        "promptBlocks": [],
        "promptHitCount": 0,
        "literalCodons": [],
        "literalCodonCount": 0,
        "codonWords": 0,
        "genomeWords": 1,
        "phenotypeWords": 0,
        "mutationWords": 0,
        "selectionWords": 0,
        "theoryWords": 0,
        "apiKeyRefs": 0,
        "cspRisk": 0,
        "words": 14,
        "visibleTextSample": "GENOMA // Video VIDEO Hub G2 G1 Context Genetics Engine Open YouTube Back To Hub",
        "companionFiles": []
      },
      "sequence": [
        {
          "type": "RSN",
          "payload": "Read GENOMA // Video as a prototype surface. Infer purpose from controls, copy, and runtime hooks without inventing missing claims.",
          "evidence": "No direct evidence extracted.",
          "weight": 45,
          "is_intron": true
        },
        {
          "type": "EVD",
          "payload": "No literal prompt blocks were extracted. Ground any future interpretation in source metrics: 14 visible words, 0 script blocks, 1 style blocks.",
          "evidence": "GENOMA // Video VIDEO Hub G2 G1 Context Genetics Engine Open YouTube Back To Hub",
          "weight": 42,
          "is_intron": true
        },
        {
          "type": "OUT",
          "payload": "Output includes embedded frames. Treat iframe content as a share/preview surface, not the same as extension runtime.",
          "evidence": "buttons=0; inputs=0; media=1",
          "weight": 42,
          "is_intron": true
        },
        {
          "type": "FLR",
          "payload": "Expected failures: ambiguous purpose or weak evidence. Respond with partial genome plus clear missing condition instead of silent breakage.",
          "evidence": "apiKeyRefs=0; cspRisk=0; fetchCalls=0",
          "weight": 45,
          "is_intron": true
        }
      ]
    },
    {
      "genome_id": "SUITE-HARNESS-G2::OPERATIONAL",
      "source_path": "suite-harness-g2.html",
      "kind": "operational",
      "title": "GENOMA HARNESS // g2",
      "metrics": {
        "bytes": 4993,
        "h1": [
          "G2 HARNESS"
        ],
        "headings": 1,
        "buttons": 0,
        "links": 8,
        "inputs": 0,
        "textareas": 0,
        "images": 0,
        "iframes": 1,
        "canvas": 0,
        "videos": 0,
        "forms": 0,
        "sections": 3,
        "inlineHandlers": 0,
        "styleBlocks": 1,
        "scriptBlocks": 1,
        "cssVars": 3,
        "mediaQueries": 1,
        "keyframes": 0,
        "gradients": 0,
        "borderRadius": 0,
        "grid": 2,
        "flex": 2,
        "functions": 3,
        "asyncFunctions": 0,
        "fetchCalls": 0,
        "localStorage": 0,
        "chromeApi": 0,
        "apiHosts": [],
        "colors": [
          "#000",
          "#fff"
        ],
        "fontFamilies": [
          "ui-monospace, SFMono-Regular, Menlo, Consolas, \"Liberation Mono\", monospace"
        ],
        "promptHits": [],
        "promptBlocks": [],
        "promptHitCount": 0,
        "literalCodons": [],
        "literalCodonCount": 0,
        "codonWords": 22,
        "genomeWords": 5,
        "phenotypeWords": 0,
        "mutationWords": 1,
        "selectionWords": 0,
        "theoryWords": 0,
        "apiKeyRefs": 0,
        "cspRisk": 1,
        "words": 57,
        "visibleTextSample": "GENOMA HARNESS // g2 G2 HARNESS CGE V8.9 WORKBENCH WITH SIDE CODEX [G2] CGE Workbench dockable lineage + matrix [G1] Context Genetics Engine dark palette / genotype / field [PBRE] Prompt Breeder specimen to genoma scope [PHUB] Prompt Husbandry transcribe genotype + meiosis [F4] Operational Pragmatics extract / encode / express / trace [SCOPE] Genoma Scope genome field visualization [ CORE INDEX ] [ OPEN RAW G2 ]",
        "companionFiles": []
      },
      "sequence": [
        {
          "type": "ROW_S",
          "payload": "Source frame for GENOMA HARNESS // g2",
          "evidence": "path=suite-harness-g2.html",
          "weight": 55,
          "is_intron": false
        },
        {
          "type": "TXT",
          "payload": "Text field: 57 words, 1 headings, density=sparse. H1=G2 HARNESS.",
          "evidence": "GENOMA HARNESS // g2 G2 HARNESS CGE V8.9 WORKBENCH WITH SIDE CODEX [G2] CGE Workbench dockable lineage + matrix [G1] Context Genetics Engine dark palette / genotype / field [PBRE] Prompt Breeder specimen to genoma scope [PHUB] Prompt Husbandry transcribe genotype + meiosis [F4] Operational Pragmatics extract / encode / express / trace [SCOPE] Genoma Scope genome field visualization [ CORE INDEX ] [ OPEN RAW G2 ]",
          "weight": 34,
          "is_intron": false
        },
        {
          "type": "STY",
          "payload": "Visual system: 1 style blocks, 3 CSS vars, 2 sampled colors, 0 radius rules, 0 animations.",
          "evidence": "#000 | #fff | ui-monospace, SFMono-Regular, Menlo, Consolas, \"Liberation Mono\", monospace",
          "weight": 52,
          "is_intron": false
        },
        {
          "type": "CDE",
          "payload": "Runtime: 1 script blocks, 3 functions, 0 fetch calls, chrome API refs=0, localStorage refs=0.",
          "evidence": "No direct evidence extracted.",
          "weight": 33,
          "is_intron": false
        },
        {
          "type": "HPL",
          "payload": "Navigation/control surface: 8 links, 0 buttons, 0 inputs, 0 textareas, 0 forms.",
          "evidence": "inlineHandlers=0; sections=3",
          "weight": 35,
          "is_intron": false
        },
        {
          "type": "IMG",
          "payload": "Media surface: images=0, iframes=1, canvas=0, video=0.",
          "evidence": "1 iframe tags",
          "weight": 43,
          "is_intron": false
        },
        {
          "type": "CMT",
          "payload": "Operational risk: CSP risk=1, API key refs=0.",
          "evidence": "1 inline script/handler risks",
          "weight": 38,
          "is_intron": false
        },
        {
          "type": "END",
          "payload": "End operational genome for suite-harness-g2.html.",
          "evidence": "",
          "weight": 50,
          "is_intron": false
        }
      ]
    },
    {
      "genome_id": "SUITE-HARNESS-G2::PROMPT",
      "source_path": "suite-harness-g2.html",
      "kind": "prompt",
      "title": "GENOMA HARNESS // g2",
      "metrics": {
        "bytes": 4993,
        "h1": [
          "G2 HARNESS"
        ],
        "headings": 1,
        "buttons": 0,
        "links": 8,
        "inputs": 0,
        "textareas": 0,
        "images": 0,
        "iframes": 1,
        "canvas": 0,
        "videos": 0,
        "forms": 0,
        "sections": 3,
        "inlineHandlers": 0,
        "styleBlocks": 1,
        "scriptBlocks": 1,
        "cssVars": 3,
        "mediaQueries": 1,
        "keyframes": 0,
        "gradients": 0,
        "borderRadius": 0,
        "grid": 2,
        "flex": 2,
        "functions": 3,
        "asyncFunctions": 0,
        "fetchCalls": 0,
        "localStorage": 0,
        "chromeApi": 0,
        "apiHosts": [],
        "colors": [
          "#000",
          "#fff"
        ],
        "fontFamilies": [
          "ui-monospace, SFMono-Regular, Menlo, Consolas, \"Liberation Mono\", monospace"
        ],
        "promptHits": [],
        "promptBlocks": [],
        "promptHitCount": 0,
        "literalCodons": [],
        "literalCodonCount": 0,
        "codonWords": 22,
        "genomeWords": 5,
        "phenotypeWords": 0,
        "mutationWords": 1,
        "selectionWords": 0,
        "theoryWords": 0,
        "apiKeyRefs": 0,
        "cspRisk": 1,
        "words": 57,
        "visibleTextSample": "GENOMA HARNESS // g2 G2 HARNESS CGE V8.9 WORKBENCH WITH SIDE CODEX [G2] CGE Workbench dockable lineage + matrix [G1] Context Genetics Engine dark palette / genotype / field [PBRE] Prompt Breeder specimen to genoma scope [PHUB] Prompt Husbandry transcribe genotype + meiosis [F4] Operational Pragmatics extract / encode / express / trace [SCOPE] Genoma Scope genome field visualization [ CORE INDEX ] [ OPEN RAW G2 ]",
        "companionFiles": []
      },
      "sequence": [
        {
          "type": "RSN",
          "payload": "Read GENOMA HARNESS // g2 as a genome workbench. Keep codons editable, inspectable, and traceable across expression.",
          "evidence": "No direct evidence extracted.",
          "weight": 45,
          "is_intron": true
        },
        {
          "type": "EVD",
          "payload": "No literal prompt blocks were extracted. Ground any future interpretation in source metrics: 57 visible words, 1 script blocks, 1 style blocks.",
          "evidence": "GENOMA HARNESS // g2 G2 HARNESS CGE V8.9 WORKBENCH WITH SIDE CODEX [G2] CGE Workbench dockable lineage + matrix [G1] Context Genetics Engine dark palette / genotype / field [PBRE] Prompt Breeder specimen to genoma scope [PHUB] Prompt Husbandry transcribe genotype + meiosis [F4] Operational Pragmatics extract / encode / express / trace [SCOPE] Genoma Scope genome field visualization [ CORE INDEX ] [ OPEN RAW G2 ]",
          "weight": 42,
          "is_intron": true
        },
        {
          "type": "OUT",
          "payload": "Output includes embedded frames. Treat iframe content as a share/preview surface, not the same as extension runtime.",
          "evidence": "buttons=0; inputs=0; media=1",
          "weight": 42,
          "is_intron": true
        },
        {
          "type": "FLR",
          "payload": "Expected failures: inline script/CSP portability. Respond with partial genome plus clear missing condition instead of silent breakage.",
          "evidence": "apiKeyRefs=0; cspRisk=1; fetchCalls=0",
          "weight": 45,
          "is_intron": true
        }
      ]
    },
    {
      "genome_id": "SUITE-HARNESS-G1::OPERATIONAL",
      "source_path": "suite-harness-g1.html",
      "kind": "operational",
      "title": "GENOMA HARNESS // g1",
      "metrics": {
        "bytes": 4991,
        "h1": [
          "G1 HARNESS"
        ],
        "headings": 1,
        "buttons": 0,
        "links": 8,
        "inputs": 0,
        "textareas": 0,
        "images": 0,
        "iframes": 1,
        "canvas": 0,
        "videos": 0,
        "forms": 0,
        "sections": 3,
        "inlineHandlers": 0,
        "styleBlocks": 1,
        "scriptBlocks": 1,
        "cssVars": 3,
        "mediaQueries": 1,
        "keyframes": 0,
        "gradients": 0,
        "borderRadius": 0,
        "grid": 2,
        "flex": 2,
        "functions": 3,
        "asyncFunctions": 0,
        "fetchCalls": 0,
        "localStorage": 0,
        "chromeApi": 0,
        "apiHosts": [],
        "colors": [
          "#000",
          "#fff"
        ],
        "fontFamilies": [
          "ui-monospace, SFMono-Regular, Menlo, Consolas, \"Liberation Mono\", monospace"
        ],
        "promptHits": [],
        "promptBlocks": [],
        "promptHitCount": 0,
        "literalCodons": [],
        "literalCodonCount": 0,
        "codonWords": 22,
        "genomeWords": 5,
        "phenotypeWords": 0,
        "mutationWords": 1,
        "selectionWords": 0,
        "theoryWords": 0,
        "apiKeyRefs": 0,
        "cspRisk": 1,
        "words": 57,
        "visibleTextSample": "GENOMA HARNESS // g1 G1 HARNESS POML V5.1 ENGINE WITH SIDE CODEX [G1] Context Genetics Engine dark palette / genotype / field [G2] CGE Workbench dockable lineage + matrix [PBRE] Prompt Breeder specimen to genoma scope [PHUB] Prompt Husbandry transcribe genotype + meiosis [F4] Operational Pragmatics extract / encode / express / trace [SCOPE] Genoma Scope genome field visualization [ CORE INDEX ] [ OPEN RAW G1 ]",
        "companionFiles": []
      },
      "sequence": [
        {
          "type": "ROW_S",
          "payload": "Source frame for GENOMA HARNESS // g1",
          "evidence": "path=suite-harness-g1.html",
          "weight": 55,
          "is_intron": false
        },
        {
          "type": "TXT",
          "payload": "Text field: 57 words, 1 headings, density=sparse. H1=G1 HARNESS.",
          "evidence": "GENOMA HARNESS // g1 G1 HARNESS POML V5.1 ENGINE WITH SIDE CODEX [G1] Context Genetics Engine dark palette / genotype / field [G2] CGE Workbench dockable lineage + matrix [PBRE] Prompt Breeder specimen to genoma scope [PHUB] Prompt Husbandry transcribe genotype + meiosis [F4] Operational Pragmatics extract / encode / express / trace [SCOPE] Genoma Scope genome field visualization [ CORE INDEX ] [ OPEN RAW G1 ]",
          "weight": 34,
          "is_intron": false
        },
        {
          "type": "STY",
          "payload": "Visual system: 1 style blocks, 3 CSS vars, 2 sampled colors, 0 radius rules, 0 animations.",
          "evidence": "#000 | #fff | ui-monospace, SFMono-Regular, Menlo, Consolas, \"Liberation Mono\", monospace",
          "weight": 52,
          "is_intron": false
        },
        {
          "type": "CDE",
          "payload": "Runtime: 1 script blocks, 3 functions, 0 fetch calls, chrome API refs=0, localStorage refs=0.",
          "evidence": "No direct evidence extracted.",
          "weight": 33,
          "is_intron": false
        },
        {
          "type": "HPL",
          "payload": "Navigation/control surface: 8 links, 0 buttons, 0 inputs, 0 textareas, 0 forms.",
          "evidence": "inlineHandlers=0; sections=3",
          "weight": 35,
          "is_intron": false
        },
        {
          "type": "IMG",
          "payload": "Media surface: images=0, iframes=1, canvas=0, video=0.",
          "evidence": "1 iframe tags",
          "weight": 43,
          "is_intron": false
        },
        {
          "type": "CMT",
          "payload": "Operational risk: CSP risk=1, API key refs=0.",
          "evidence": "1 inline script/handler risks",
          "weight": 38,
          "is_intron": false
        },
        {
          "type": "END",
          "payload": "End operational genome for suite-harness-g1.html.",
          "evidence": "",
          "weight": 50,
          "is_intron": false
        }
      ]
    },
    {
      "genome_id": "SUITE-HARNESS-G1::PROMPT",
      "source_path": "suite-harness-g1.html",
      "kind": "prompt",
      "title": "GENOMA HARNESS // g1",
      "metrics": {
        "bytes": 4991,
        "h1": [
          "G1 HARNESS"
        ],
        "headings": 1,
        "buttons": 0,
        "links": 8,
        "inputs": 0,
        "textareas": 0,
        "images": 0,
        "iframes": 1,
        "canvas": 0,
        "videos": 0,
        "forms": 0,
        "sections": 3,
        "inlineHandlers": 0,
        "styleBlocks": 1,
        "scriptBlocks": 1,
        "cssVars": 3,
        "mediaQueries": 1,
        "keyframes": 0,
        "gradients": 0,
        "borderRadius": 0,
        "grid": 2,
        "flex": 2,
        "functions": 3,
        "asyncFunctions": 0,
        "fetchCalls": 0,
        "localStorage": 0,
        "chromeApi": 0,
        "apiHosts": [],
        "colors": [
          "#000",
          "#fff"
        ],
        "fontFamilies": [
          "ui-monospace, SFMono-Regular, Menlo, Consolas, \"Liberation Mono\", monospace"
        ],
        "promptHits": [],
        "promptBlocks": [],
        "promptHitCount": 0,
        "literalCodons": [],
        "literalCodonCount": 0,
        "codonWords": 22,
        "genomeWords": 5,
        "phenotypeWords": 0,
        "mutationWords": 1,
        "selectionWords": 0,
        "theoryWords": 0,
        "apiKeyRefs": 0,
        "cspRisk": 1,
        "words": 57,
        "visibleTextSample": "GENOMA HARNESS // g1 G1 HARNESS POML V5.1 ENGINE WITH SIDE CODEX [G1] Context Genetics Engine dark palette / genotype / field [G2] CGE Workbench dockable lineage + matrix [PBRE] Prompt Breeder specimen to genoma scope [PHUB] Prompt Husbandry transcribe genotype + meiosis [F4] Operational Pragmatics extract / encode / express / trace [SCOPE] Genoma Scope genome field visualization [ CORE INDEX ] [ OPEN RAW G1 ]",
        "companionFiles": []
      },
      "sequence": [
        {
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          "var(--mono)"
        ],
        "promptHits": [
          "You are the CONTEXT GENETICS ENGINE. Your task is to extract or generate a structured JSON array of \"prompt codons\" (genes) that form a system prompt architecture. LOCI: - RSN: Reasoning Order - EVD: Evidence Policy -...",
          "You must strictly adhere to the following instructions:\\n\\n"
        ],
        "promptBlocks": [
          {
            "kind": "js_template",
            "label": "AI_BREEDER_PROMPT",
            "locus": "OUT",
            "text": "You are the CONTEXT GENETICS ENGINE. Your task is to extract or generate a structured JSON array of \"prompt codons\" (genes) that form a system prompt architecture. LOCI: - RSN: Reasoning Order - EVD: Evidence Policy - OUT: Output Form - FLR: Failure Handling - FIT: Fitness Pressure / Optimization target - CST: Custom explicit trait/constraint Output purely the requested JSON structures. Codon Schema: { \"type\": \"...\", \"payload\": \"specific instruction text\", \"state\": \"EXON\", \"weight\": integer }",
            "weight": 98
          },
          {
            "kind": "js_string",
            "label": "systemPrompt",
            "locus": "CST",
            "text": "You must strictly adhere to the following instructions:\\n\\n",
            "weight": 92.26818181818182
          }
        ],
        "promptHitCount": 2,
        "literalCodons": [
          {
            "type": "RSN",
            "payload": "Construct theory before output.",
            "source": "{ id: generateId(), type: 'RSN', payload: 'Construct theory before output.', state: 'EXON', weight: 90, images: [] }",
            "weight": 78.775
          },
          {
            "type": "FIT",
            "payload": "Optimize for conceptual compression and precision.",
            "source": "{ id: generateId(), type: 'FIT', payload: 'Optimize for conceptual compression and precision.', state: 'EXON', weight: 80, images: [] }",
            "weight": 79.25
          }
        ],
        "literalCodonCount": 2,
        "codonWords": 57,
        "genomeWords": 80,
        "phenotypeWords": 19,
        "mutationWords": 50,
        "selectionWords": 11,
        "theoryWords": 37,
        "apiKeyRefs": 4,
        "cspRisk": 58,
        "words": 240,
        "visibleTextSample": "CONTEXT GENETICS ENGINE SYS: READY UNDO HELP IMPORT EXPORT TRACE CONSOLE \u25b2 SHOW ECOLOGY INITIALIZED. Awaiting Breeder Operations... Palette Upstream Breeding Chamber ? 01 Artificial Selection Engine INGEST + VISION Inject Locus (Manual) REASONING Define cognitive sequence. EVIDENCE Bound hallucination risk. OUTPUT Control structural phenotype. FAILURE Set error recovery logic. FITNESS Define survival metrics. CUST...",
        "companionFiles": []
      },
      "sequence": [
        {
          "type": "RSN",
          "payload": "Construct theory before output.",
          "evidence": "literal codon in source: { id: generateId(), type: 'RSN', payload: 'Construct theory before output.', state: 'EXON', weight: 90, images: [] }",
          "weight": 79,
          "is_intron": false
        },
        {
          "type": "FIT",
          "payload": "Optimize for conceptual compression and precision.",
          "evidence": "literal codon in source: { id: generateId(), type: 'FIT', payload: 'Optimize for conceptual compression and precision.', state: 'EXON', weight: 80, images: [] }",
          "weight": 79,
          "is_intron": false
        },
        {
          "type": "OUT",
          "payload": "AI_BREEDER_PROMPT: You are the CONTEXT GENETICS ENGINE. Your task is to extract or generate a structured JSON array of \"prompt codons\" (genes) that form a system prompt architecture. LOCI: - RSN: Reasoning Order - EVD: Evidence Policy - OUT: Output Form - FLR: Failure Handling - FIT: Fitness Pressure / Optimization target - CST: Custom explicit trait/constraint Output purely the requested JSON structures. Codon Schema: { \"type\": \"...\", \"payload\": \"specific instruction text\", \"state\": \"EXON\", \"weight\": integer }",
          "evidence": "js_template prompt block in source; label=AI_BREEDER_PROMPT",
          "weight": 98,
          "is_intron": false
        },
        {
          "type": "CST",
          "payload": "systemPrompt: You must strictly adhere to the following instructions:\\n\\n",
          "evidence": "js_string prompt block in source; label=systemPrompt",
          "weight": 92,
          "is_intron": false
        },
        {
          "type": "EVD",
          "payload": "Prompt genome assembled from 2 literal codon payloads and 2 source prompt blocks in 1 script blocks.",
          "evidence": "visibleWords=240; promptBlocks=2; literalCodons=2; apiHosts=www.w3.org,generativelanguage.googleapis.com,api.allorigins.win",
          "weight": 68,
          "is_intron": false
        }
      ]
    },
    {
      "genome_id": "EXTENSION-SHARE::OPERATIONAL",
      "source_path": "extension-share.html",
      "kind": "operational",
      "title": "GENOMA // Mobile Share",
      "metrics": {
        "bytes": 6161,
        "h1": [
          "Mobile Share"
        ],
        "headings": 1,
        "buttons": 4,
        "links": 4,
        "inputs": 0,
        "textareas": 0,
        "images": 1,
        "iframes": 1,
        "canvas": 0,
        "videos": 0,
        "forms": 0,
        "sections": 6,
        "inlineHandlers": 0,
        "styleBlocks": 1,
        "scriptBlocks": 1,
        "cssVars": 5,
        "mediaQueries": 1,
        "keyframes": 0,
        "gradients": 0,
        "borderRadius": 0,
        "grid": 4,
        "flex": 3,
        "functions": 3,
        "asyncFunctions": 0,
        "fetchCalls": 0,
        "localStorage": 0,
        "chromeApi": 0,
        "apiHosts": [],
        "colors": [
          "#000",
          "#fff"
        ],
        "fontFamilies": [
          "ui-monospace, SFMono-Regular, Menlo, Consolas, \"Liberation Mono\", monospace"
        ],
        "promptHits": [],
        "promptBlocks": [],
        "promptHitCount": 0,
        "literalCodons": [],
        "literalCodonCount": 0,
        "codonWords": 0,
        "genomeWords": 10,
        "phenotypeWords": 0,
        "mutationWords": 1,
        "selectionWords": 1,
        "theoryWords": 1,
        "apiKeyRefs": 0,
        "cspRisk": 1,
        "words": 108,
        "visibleTextSample": "GENOMA // Mobile Share Mobile Share Link-safe surface Artifact and atlas previews Extension runtime stays desktop Hub Atlas Video Mobile Notes Panels Panel links are previews outside the extension runtime. Real page capture needs desktop Chrome or Edge with Load Unpacked. Artifacts Artifacts and the atlas work as normal linked pages, so they are the right mobile and iframe surfaces. Share Bundle The future share o...",
        "companionFiles": []
      },
      "sequence": [
        {
          "type": "ROW_S",
          "payload": "Source frame for GENOMA // Mobile Share",
          "evidence": "path=extension-share.html",
          "weight": 55,
          "is_intron": false
        },
        {
          "type": "TXT",
          "payload": "Text field: 108 words, 1 headings, density=sparse. H1=Mobile Share.",
          "evidence": "GENOMA // Mobile Share Mobile Share Link-safe surface Artifact and atlas previews Extension runtime stays desktop Hub Atlas Video Mobile Notes Panels Panel links are previews outside the extension runtime. Real page capture needs desktop Chrome or Edge with Load Unpacked. Artifacts Artifacts and the atlas work as normal linked pages, so they are the right mobile and iframe surfaces. Share Bundle The future share o...",
          "weight": 35,
          "is_intron": false
        },
        {
          "type": "STY",
          "payload": "Visual system: 1 style blocks, 5 CSS vars, 2 sampled colors, 0 radius rules, 0 animations.",
          "evidence": "#000 | #fff | ui-monospace, SFMono-Regular, Menlo, Consolas, \"Liberation Mono\", monospace",
          "weight": 54,
          "is_intron": false
        },
        {
          "type": "CDE",
          "payload": "Runtime: 1 script blocks, 3 functions, 0 fetch calls, chrome API refs=0, localStorage refs=0.",
          "evidence": "No direct evidence extracted.",
          "weight": 33,
          "is_intron": false
        },
        {
          "type": "HPL",
          "payload": "Navigation/control surface: 4 links, 4 buttons, 0 inputs, 0 textareas, 0 forms.",
          "evidence": "inlineHandlers=0; sections=6",
          "weight": 47,
          "is_intron": false
        },
        {
          "type": "IMG",
          "payload": "Media surface: images=1, iframes=1, canvas=0, video=0.",
          "evidence": "1 img tags; 1 iframe tags",
          "weight": 51,
          "is_intron": false
        },
        {
          "type": "CMT",
          "payload": "Operational risk: CSP risk=1, API key refs=0.",
          "evidence": "1 inline script/handler risks",
          "weight": 38,
          "is_intron": false
        },
        {
          "type": "END",
          "payload": "End operational genome for extension-share.html.",
          "evidence": "",
          "weight": 50,
          "is_intron": false
        }
      ]
    },
    {
      "genome_id": "EXTENSION-SHARE::PROMPT",
      "source_path": "extension-share.html",
      "kind": "prompt",
      "title": "GENOMA // Mobile Share",
      "metrics": {
        "bytes": 6161,
        "h1": [
          "Mobile Share"
        ],
        "headings": 1,
        "buttons": 4,
        "links": 4,
        "inputs": 0,
        "textareas": 0,
        "images": 1,
        "iframes": 1,
        "canvas": 0,
        "videos": 0,
        "forms": 0,
        "sections": 6,
        "inlineHandlers": 0,
        "styleBlocks": 1,
        "scriptBlocks": 1,
        "cssVars": 5,
        "mediaQueries": 1,
        "keyframes": 0,
        "gradients": 0,
        "borderRadius": 0,
        "grid": 4,
        "flex": 3,
        "functions": 3,
        "asyncFunctions": 0,
        "fetchCalls": 0,
        "localStorage": 0,
        "chromeApi": 0,
        "apiHosts": [],
        "colors": [
          "#000",
          "#fff"
        ],
        "fontFamilies": [
          "ui-monospace, SFMono-Regular, Menlo, Consolas, \"Liberation Mono\", monospace"
        ],
        "promptHits": [],
        "promptBlocks": [],
        "promptHitCount": 0,
        "literalCodons": [],
        "literalCodonCount": 0,
        "codonWords": 0,
        "genomeWords": 10,
        "phenotypeWords": 0,
        "mutationWords": 1,
        "selectionWords": 1,
        "theoryWords": 1,
        "apiKeyRefs": 0,
        "cspRisk": 1,
        "words": 108,
        "visibleTextSample": "GENOMA // Mobile Share Mobile Share Link-safe surface Artifact and atlas previews Extension runtime stays desktop Hub Atlas Video Mobile Notes Panels Panel links are previews outside the extension runtime. Real page capture needs desktop Chrome or Edge with Load Unpacked. Artifacts Artifacts and the atlas work as normal linked pages, so they are the right mobile and iframe surfaces. Share Bundle The future share o...",
        "companionFiles": []
      },
      "sequence": [
        {
          "type": "RSN",
          "payload": "Read GENOMA // Mobile Share as a side-panel tool. Separate page capture, model reasoning, and live-page mutation.",
          "evidence": "No direct evidence extracted.",
          "weight": 45,
          "is_intron": true
        },
        {
          "type": "EVD",
          "payload": "No literal prompt blocks were extracted. Ground any future interpretation in source metrics: 108 visible words, 1 script blocks, 1 style blocks.",
          "evidence": "GENOMA // Mobile Share Mobile Share Link-safe surface Artifact and atlas previews Extension runtime stays desktop Hub Atlas Video Mobile Notes Panels Panel links are previews outside the extension runtime. Real page capture needs desktop Chrome or Edge with Load Unpacked. Artifacts Artifacts and the atlas work as normal linked pages, so they are the right mobile and iframe surfaces. Share Bundle The future share o...",
          "weight": 42,
          "is_intron": true
        },
        {
          "type": "OUT",
          "payload": "Output includes embedded frames. Treat iframe content as a share/preview surface, not the same as extension runtime.",
          "evidence": "buttons=4; inputs=0; media=2",
          "weight": 42,
          "is_intron": true
        },
        {
          "type": "FLR",
          "payload": "Expected failures: inline script/CSP portability. Respond with partial genome plus clear missing condition instead of silent breakage.",
          "evidence": "apiKeyRefs=0; cspRisk=1; fetchCalls=0",
          "weight": 45,
          "is_intron": true
        }
      ]
    }
  ],
  "colors": {
    "operational": {
      "TXT": "#4ade80",
      "HPL": "#38bdf8",
      "IMG": "#fb923c",
      "AUC": "#c084fc",
      "VID": "#f87171",
      "CMT": "#a3a3a3",
      "STY": "#94a3b8",
      "CDE": "#eab308",
      "ROW_S": "#64748b",
      "COL_S": "#475569",
      "END": "#f97316"
    },
    "prompt": {
      "RSN": "#60a5fa",
      "EVD": "#4ade80",
      "OUT": "#f8fafc",
      "FIT": "#c084fc",
      "FLR": "#f87171",
      "CST": "#fbbf24",
      "MUT": "#f472b6",
      "SEL": "#fb923c",
      "CMT": "#a3a3a3"
    }
  }
}
